moleculekit.projections package

Submodules

• moleculekit.projections.metriccoordinate module
  • MetricCoordinate
    • MetricCoordinate.getMapping()
    • MetricCoordinate.project()
• moleculekit.projections.metricdihedral module
  • AtomNotFoundException
  • Dihedral
    • Dihedral.chi1()
    • Dihedral.chi2()
    • Dihedral.chi3()
    • Dihedral.chi4()
    • Dihedral.chi5()
    • Dihedral.dihedralsToIndexes()
    • Dihedral.omega()
    • Dihedral.phi()
    • Dihedral.proteinDihedrals()
    • Dihedral.psi()
  • MetricDihedral
    • MetricDihedral.getMapping()
    • MetricDihedral.project()
• moleculekit.projections.metricdistance module
  • MetricDistance
    • MetricDistance.getMapping()
    • MetricDistance.project()
  • MetricSelfDistance
  • contactVecToMatrix()
  • reconstructContactMap()
• moleculekit.projections.metricfluctuation module
  • MetricFluctuation
    • MetricFluctuation.getMapping()
    • MetricFluctuation.project()
• moleculekit.projections.metricgyration module
  • MetricGyration
    • MetricGyration.getMapping()
    • MetricGyration.project()
• moleculekit.projections.metricplumed2 module
  • MetricPlumed2
    • MetricPlumed2.getMapping()
    • MetricPlumed2.project()
  • PlumedCOM
  • PlumedCV
    • PlumedCV.genTemplate()
  • PlumedGenericGroup
  • PlumedGroup
  • PlumedMolinfo
  • PlumedStatement
  • PlumedVerbatim
  • genTemplate()
  • manual()
• moleculekit.projections.metricrmsd module
  • MetricRmsd
    • MetricRmsd.getMapping()
    • MetricRmsd.project()
• moleculekit.projections.metricsasa module
  • MetricSasa
    • MetricSasa.getMapping()
    • MetricSasa.project()
• moleculekit.projections.metricsecondarystructure module
  • MetricSecondaryStructure
    • MetricSecondaryStructure.getMapping()
    • MetricSecondaryStructure.project()
• moleculekit.projections.metricshell module
  • MetricShell
    • MetricShell.getMapping()
    • MetricShell.project()
• moleculekit.projections.metricsphericalcoordinate module
  • MetricSphericalCoordinate
    • MetricSphericalCoordinate.getMapping()
    • MetricSphericalCoordinate.project()
• moleculekit.projections.metrictmscore module
  • MetricTMscore
    • MetricTMscore.getMapping()
    • MetricTMscore.project()
• moleculekit.projections.projection module
  • Projection
    • Projection.copy()
    • Projection.getMapping()
    • Projection.project()
• moleculekit.projections.util module
  • get_reduced_distances()
  • pp_calcDistances()
  • pp_calcMinDistances()

Module contents