moleculekit.vmdgraphics module¶

class moleculekit.vmdgraphics.VMDBox(box, color='red')¶: Bases: moleculekit.vmdgraphics.VMDGraphicObject

class moleculekit.vmdgraphics.VMDConvexHull(mol, style='', preamble='', solid=False)¶: Bases: moleculekit.vmdgraphics.VMDGraphicObject

class moleculekit.vmdgraphics.VMDCylinder(start, end, color='red', radius=1)¶: Bases: moleculekit.vmdgraphics.VMDGraphicObject

class moleculekit.vmdgraphics.VMDGraphicObject(data)¶

Bases: object

A superclass from which VMD graphic objects (e.g. the convex hull) inherit.

counter = 1¶

delete()¶: Undisplay and delete a graphic object.

static tq(v)¶: Quote a numpy 3-vector to a TCL list.

class moleculekit.vmdgraphics.VMDIsosurface(arr, vecMin, vecRes, color=8, isovalue=0.5, name=None, draw='solid')¶

Bases: moleculekit.vmdgraphics.VMDGraphicObject

delete()¶: Undisplay and delete a graphic object.

class moleculekit.vmdgraphics.VMDLabels(mol, selection, molid='top', textsize=0.5, textcolor='green')¶

Bases: moleculekit.vmdgraphics.VMDGraphicObject

count = 0¶

delete()¶: Undisplay and delete a graphic object.

class moleculekit.vmdgraphics.VMDSphere(xyz, color='red', radius=1)¶: Bases: moleculekit.vmdgraphics.VMDGraphicObject

class moleculekit.vmdgraphics.VMDText(text, xyz, color='red')¶: Bases: moleculekit.vmdgraphics.VMDGraphicObject