MetricSecondaryStructure(sel='protein', simplified=True, integer=True)¶
Calculates the secondary structure of the protein. DSSP implementation and documentation taken from MDtraj.
A special ‘NA’ code will be assigned to each ‘residue’ in the topology which isn’t actually a protein residue (does not contain atoms with the names ‘CA’, ‘N’, ‘C’, ‘O’), such as water molecules that are listed as ‘residue’s in the topology.
Produces a deep copy of the object
Returns the description of each projected dimension.
|Returns:||map – A DataFrame containing the descriptions of each dimension|