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ACEMD

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  • Installation
  • Tutorials
  • How-to guides
  • Reference
  • Explanation
  • Acellera
  • Twitter
  • GitHub
  • LinkedIn
  • Youtube
  • Medium

Section Navigation

  • Command-line arguments
  • Input-file options
  • External forces
  • NNP options
  • acemd.acemd module
  • acemd.protocols module
  • acemd.utils module
  • acemd.input module
  • acemd.charmm module
  • acemd.system module
  • acemd.minimizer module
  • acemd.nnp module
  • acemd.restraints module
  • acemd.reporters module
  • acemd.licensing module
  • acemd.versionwarnings module
  • Release notes
  • License
  • Reference

Reference#

Look-up material — flags, option keys, signatures.

Command-line and input file#

  • Command-line arguments
  • Input-file options
  • External forces
  • NNP options

Python API#

Auto-generated from source.

  • acemd.acemd module
  • acemd.protocols module
  • acemd.utils module
  • acemd.input module
  • acemd.charmm module
  • acemd.system module
  • acemd.minimizer module
  • acemd.nnp module
  • acemd.restraints module
  • acemd.reporters module
  • acemd.licensing module
  • acemd.versionwarnings module

Project metadata#

  • Release notes
  • License

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Run from a PDB (OpenMM XML and OpenFF)

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Command-line arguments

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  • Python API
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